ASPECT
interface.h
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1 /*
2  Copyright (C) 2011 - 2024 by the authors of the ASPECT code.
3 
4  This file is part of ASPECT.
5 
6  ASPECT is free software; you can redistribute it and/or modify
7  it under the terms of the GNU General Public License as published by
8  the Free Software Foundation; either version 2, or (at your option)
9  any later version.
10 
11  ASPECT is distributed in the hope that it will be useful,
12  but WITHOUT ANY WARRANTY; without even the implied warranty of
13  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
14  GNU General Public License for more details.
15 
16  You should have received a copy of the GNU General Public License
17  along with ASPECT; see the file LICENSE. If not see
18  <http://www.gnu.org/licenses/>.
19 */
20 
21 
22 #ifndef _aspect_mesh_deformation_interface_h
23 #define _aspect_mesh_deformation_interface_h
24 
25 #include <aspect/plugins.h>
27 #include <aspect/global.h>
28 
29 #include <deal.II/fe/fe_system.h>
32 #include <deal.II/base/index_set.h>
37 #include <deal.II/multigrid/mg_transfer_global_coarsening.templates.h>
39 
40 namespace aspect
41 {
42  namespace Assemblers
43  {
50  template <int dim>
52  public SimulatorAccess<dim>
53  {
54  public:
55  ApplyStabilization(const double stabilization_theta);
56 
57  void
60 
61  private:
67  const double free_surface_theta;
68  };
69  }
70 
71  template <int dim> class Simulator;
72 
77  namespace MeshDeformation
78  {
88  template <int dim>
90  {
91  public:
95  virtual bool needs_surface_stabilization() const;
96 
97 
105  virtual
107  compute_initial_deformation_on_boundary(const types::boundary_id boundary_indicator,
108  const Point<dim> &position) const;
109 
110 
121  virtual
122  void
123  compute_initial_deformation_as_constraints(const Mapping<dim> &mapping,
124  const DoFHandler<dim> &mesh_deformation_dof_handler,
125  const types::boundary_id boundary_indicator,
126  AffineConstraints<double> &constraints) const;
127 
135  virtual
136  void
137  compute_velocity_constraints_on_boundary(const DoFHandler<dim> &mesh_deformation_dof_handler,
138  AffineConstraints<double> &mesh_velocity_constraints,
139  const std::set<types::boundary_id> &boundary_ids) const;
140 
155  virtual
156  double
157  boundary_composition (const types::boundary_id boundary_indicator,
158  const Point<dim> &position,
159  const unsigned int compositional_field) const;
160  };
161 
162 
163 
169  template <int dim>
170  class MeshDeformationHandler: public SimulatorAccess<dim>
171  {
172  public:
180 
184  ~MeshDeformationHandler() override;
185 
191  void initialize();
192 
197  void set_assemblers(const SimulatorAccess<dim> &simulator_access,
198  aspect::Assemblers::Manager<dim> &assemblers) const;
199 
204  void update();
205 
213  void execute();
214 
219  void setup_dofs();
220 
224  static
226 
231 
236  template <class Archive>
237  void save (Archive &ar,
238  const unsigned int version) const;
239 
244  template <class Archive>
245  void load (Archive &ar,
246  const unsigned int version);
247 
248  BOOST_SERIALIZATION_SPLIT_MEMBER()
249 
250 
267  static
268  void
269  register_mesh_deformation
270  (const std::string &name,
271  const std::string &description,
272  void (*declare_parameters_function) (ParameterHandler &),
273  std::unique_ptr<Interface<dim>> (*factory_function) ());
274 
279  const std::map<types::boundary_id, std::vector<std::string>> &
280  get_active_mesh_deformation_names () const;
281 
286  const std::map<types::boundary_id,std::vector<std::unique_ptr<Interface<dim>>>> &
287  get_active_mesh_deformation_models () const;
288 
293  const std::set<types::boundary_id> &
294  get_active_mesh_deformation_boundary_indicators () const;
295 
301  const std::set<types::boundary_id> &
302  get_tangential_velocity_with_active_mesh_deformation_boundary_indicators () const;
303 
309  const std::set<types::boundary_id> &
310  get_tangential_velocity_without_active_mesh_deformation_boundary_indicators () const;
311 
316  const std::set<types::boundary_id> &
317  get_boundary_indicators_requiring_stabilization () const;
318 
324  const std::set<types::boundary_id> &
325  get_free_surface_boundary_indicators () const;
326 
330  double get_free_surface_theta () const;
331 
346  const LinearAlgebra::Vector &
347  get_initial_topography () const;
348 
353  const LinearAlgebra::Vector &
354  get_mesh_displacements () const;
355 
359  const DoFHandler<dim> &
360  get_mesh_deformation_dof_handler () const;
361 
371  template <typename MeshDeformationType,
372  typename = typename std::enable_if_t<std::is_base_of<Interface<dim>,MeshDeformationType>::value>>
373  bool
374  has_matching_mesh_deformation_object () const;
375 
387  template <typename MeshDeformationType,
388  typename = typename std::enable_if_t<std::is_base_of<Interface<dim>,MeshDeformationType>::value>>
389  const MeshDeformationType &
390  get_matching_mesh_deformation_object () const;
391 
392 
398  const Mapping<dim> &
399  get_level_mapping(const unsigned int level) const;
400 
408  double
409  boundary_composition (const types::boundary_id boundary_indicator,
410  const Point<dim> &position,
411  const unsigned int compositional_field) const;
412 
422  static
423  void
424  write_plugin_graph (std::ostream &output_stream);
425 
429  DeclException1 (ExcMeshDeformationNameNotFound,
430  std::string,
431  << "Could not find entry <"
432  << arg1
433  << "> among the names of registered mesh deformation objects.");
434 
435  private:
443  void make_initial_constraints ();
444 
457  void make_constraints ();
458 
463  void compute_mesh_displacements ();
464 
469  void compute_mesh_displacements_gmg ();
470 
479  unsigned int get_mapping_degree () const;
480 
486  template <unsigned int mesh_deformation_fe_degree>
487  void compute_mesh_displacements_gmg_for_degree();
488 
504  void set_initial_topography ();
505 
509  void interpolate_mesh_velocity ();
510 
514  void update_multilevel_deformation ();
515 
521 
527 
532 
539 
547 
552 
562 
572 
577 
582 
588 
594 
599  std::map<types::boundary_id,std::vector<std::unique_ptr<Interface<dim>>>> mesh_deformation_objects;
600 
605  std::map<types::boundary_id, std::vector<std::string>> mesh_deformation_object_names;
606 
613 
620 
627 
633 
640  std::set<types::boundary_id> zero_mesh_deformation_boundary_indicators;
641 
647  std::set<types::boundary_id> free_surface_boundary_indicators;
648 
653  std::set<types::boundary_id> boundary_indicators_requiring_stabilization;
654 
656 
665 
670 
675 
680 
685 
690 
695 
696  friend class Simulator<dim>;
697  friend class SimulatorAccess<dim>;
698  };
699 
700 
701  template <int dim>
702  template <class Archive>
704  const unsigned int) const
705  {
706  // let all the mesh deformation plugins save their data in a map and then
707  // serialize that
708  //TODO: for now we assume the same plugins are active before and after restart.
709  std::map<std::string,std::string> saved_text;
710  for (const auto &boundary_id_and_mesh_deformation_objects : mesh_deformation_objects)
711  for (const auto &p : boundary_id_and_mesh_deformation_objects.second)
712  p->save (saved_text);
713 
714  ar &saved_text;
715  }
716 
717 
718  template <int dim>
719  template <class Archive>
721  const unsigned int)
722  {
723  // get the map back out of the stream; then let the mesh deformation plugins
724  // that we currently have get their data from there. note that this
725  // may not be the same set ofmesh deformation plugins we had when we saved
726  // their data
727  std::map<std::string,std::string> saved_text;
728  ar &saved_text;
729 
730  for (const auto &boundary_id_and_mesh_deformation_objects : mesh_deformation_objects)
731  for (const auto &p : boundary_id_and_mesh_deformation_objects.second)
732  p->load (saved_text);
733  }
734 
735 
736 
737 
738  template <int dim>
739  template <typename MeshDeformationType, typename>
740  inline
741  bool
743  {
744  for (const auto &object_iterator : mesh_deformation_objects)
745  for (const auto &p : object_iterator.second)
746  if (Plugins::plugin_type_matches<MeshDeformationType>(*p))
747  return true;
748 
749  return false;
750  }
751 
752 
753 
754  template <int dim>
755  template <typename MeshDeformationType, typename>
756  inline
757  const MeshDeformationType &
759  {
760  AssertThrow(has_matching_mesh_deformation_object<MeshDeformationType> (),
761  ExcMessage("You asked MeshDeformation::MeshDeformationHandler::get_matching_mesh_deformation_object() for a "
762  "mesh deformation object of type <" + boost::core::demangle(typeid(MeshDeformationType).name()) + "> "
763  "that could not be found in the current model. Activate this "
764  "mesh deformation in the input file."));
765 
766  for (const auto &object_iterator : mesh_deformation_objects)
767  for (const auto &p : object_iterator.second)
768  if (Plugins::plugin_type_matches<MeshDeformationType>(*p))
769  return Plugins::get_plugin_as_type<MeshDeformationType>(*p);
770 
771  // We will never get here, because we had the Assert above. Just to avoid warnings.
772  typename std::vector<std::unique_ptr<Interface<dim>>>::const_iterator mesh_def;
773  return Plugins::get_plugin_as_type<MeshDeformationType>(*(*mesh_def));
774 
775  }
776 
777 
784  template <int dim>
785  std::string
787 
788 
789 
797 #define ASPECT_REGISTER_MESH_DEFORMATION_MODEL(classname,name,description) \
798  template class classname<2>; \
799  template class classname<3>; \
800  namespace ASPECT_REGISTER_MESH_DEFORMATION_MODEL_ ## classname \
801  { \
802  aspect::internal::Plugins::RegisterHelper<aspect::MeshDeformation::Interface<2>,classname<2>> \
803  dummy_ ## classname ## _2d (&aspect::MeshDeformation::MeshDeformationHandler<2>::register_mesh_deformation, \
804  name, description); \
805  aspect::internal::Plugins::RegisterHelper<aspect::MeshDeformation::Interface<3>,classname<3>> \
806  dummy_ ## classname ## _3d (&aspect::MeshDeformation::MeshDeformationHandler<3>::register_mesh_deformation, \
807  name, description); \
808  }
809  }
810 }
811 
812 #endif
virtual void parse_parameters(ParameterHandler &prm)
std::vector< index_type > data
ApplyStabilization(const double stabilization_theta)
std::set< types::boundary_id > prescribed_mesh_deformation_boundary_indicators
Definition: interface.h:612
MGTransferType< dim, double > mg_transfer
Definition: interface.h:689
#define AssertThrow(cond, exc)
std::set< types::boundary_id > tangential_velocity_without_prescribed_mesh_deformation_boundary_indicators
Definition: interface.h:626
MGLevelObject<::LinearAlgebra::distributed::Vector< double > > level_displacements
Definition: interface.h:684
void write_plugin_graph(std::ostream &output_stream)
std::set< types::boundary_id > boundary_indicators_requiring_stabilization
Definition: interface.h:653
AffineConstraints< double > mesh_velocity_constraints
Definition: interface.h:587
std::set< types::boundary_id > tangential_mesh_deformation_boundary_indicators
Definition: interface.h:632
AffineConstraints< double > mesh_vertex_constraints
Definition: interface.h:593
MGLevelObject< std::unique_ptr< Mapping< dim > > > level_mappings
Definition: interface.h:679
virtual void load(const std::map< std::string, std::string > &status_strings)
std::map< types::boundary_id, std::vector< std::string > > mesh_deformation_object_names
Definition: interface.h:605
LinearAlgebra::BlockVector mesh_velocity
Definition: interface.h:538
std::map< types::boundary_id, std::vector< std::unique_ptr< Interface< dim > > > > mesh_deformation_objects
Definition: interface.h:599
std::string get_valid_model_names_pattern()
unsigned int level
std::set< types::boundary_id > tangential_velocity_with_prescribed_mesh_deformation_boundary_indicators
Definition: interface.h:619
void load(Archive &ar, const unsigned int version)
Definition: interface.h:720
static ::ExceptionBase & ExcMessage(std::string arg1)
void execute(internal::Assembly::Scratch::ScratchBase< dim > &scratch, internal::Assembly::CopyData::CopyDataBase< dim > &data) const override
virtual void save(std::map< std::string, std::string > &status_strings) const
std::set< types::boundary_id > free_surface_boundary_indicators
Definition: interface.h:647
void save(Archive &ar, const unsigned int version) const
Definition: interface.h:703
std::set< types::boundary_id > zero_mesh_deformation_boundary_indicators
Definition: interface.h:640
static void declare_parameters(ParameterHandler &prm)
ObserverPointer< const Simulator< dim >, SimulatorAccess< dim > > simulator
DeclException1(ProbabilityFunctionNegative, Point< dim >,<< "Your probability density function in the particle generator " "returned a negative probability density for the following position: "<< arg1<< ". Please check your function expression.")